How to Download Google Cloud Data to HPC

Keren Xu

2021/02/14

First step is to install Cloud SDK on HPC.
Then link your google cloud account:

gcloud init

Finally, select the bucket that you want to download data from. Here, for example, select GATK reference dataset for somatic variant calling:

gsutil -m cp gs://gatk-best-practices/somatic-hg38/* .